BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates
UNISANGIL has one of Colombia's five collections of aquatic macroinvertebrates, being the only one in the Department of Santander. The bioinformatics platform "Biological Collection - BiolCol" seeks to digitize the biological reference collection of macroinvertebrates of UNISANGIL-CBM...
| Main Authors: | , , , , , |
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| Format: | Online |
| Language: | eng |
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Universidad Pedagógica y Tecnológica de Colombia
2023
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| Online Access: | https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525 |
| _version_ | 1801706102722658304 |
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| author | Caicedo-Chacón, Luz-Yamile Barón-González, Henry-Javier Sánchez-Pedroza, Juan-Carlos Aguilar-Carreño, Carlos-Alberto Vega-Otálora, Kevin-Santiago Borja-Acosta, Kevin-Giancarlo |
| author_facet | Caicedo-Chacón, Luz-Yamile Barón-González, Henry-Javier Sánchez-Pedroza, Juan-Carlos Aguilar-Carreño, Carlos-Alberto Vega-Otálora, Kevin-Santiago Borja-Acosta, Kevin-Giancarlo |
| author_sort | Caicedo-Chacón, Luz-Yamile |
| collection | OJS |
| description | UNISANGIL has one of Colombia's five collections of aquatic macroinvertebrates, being the only one in the Department of Santander. The bioinformatics platform "Biological Collection - BiolCol" seeks to digitize the biological reference collection of macroinvertebrates of UNISANGIL-CBMUS. The design of BioCol was led by three students and the coordinator of the GIBD-SI of the UNISANGIL Systems Engineering Program. The work methodology applied in the development process was Scrum. Additionally, we followed the method Sampieri proposed to identify the needs, establish the objectives, define the scope, formulate the projected activities over time, and define the deliverables for developing the application. Based on the Darwin Core standard used by the Colombian biodiversity information system (SiB Colombia), we designed the system architecture, built models, and designed the database. To develop the interface, we used Laravel for the back end and NodeJS for the front end, and we integrated the images and 3D models of those specimens with available information. The platform allows the online registration, storage, and visualization of information CBMUS collection specimens. It also generates a label with a QR code for each individual, which enables queries of the data stored for each specimen. Overall, this platform aims to facilitate the registration, administration, and dissemination of biological collection information for researchers and the community in general. |
| format | Online |
| id | oai:oai.revistas.uptc.edu.co:article-15525 |
| institution | Revista Facultad de Ingeniería |
| language | eng |
| publishDate | 2023 |
| publisher | Universidad Pedagógica y Tecnológica de Colombia |
| record_format | ojs |
| spelling | oai:oai.revistas.uptc.edu.co:article-155252023-09-03T14:41:17Z BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates BiolCol: Plataforma tecnológica para la difusión de la colección biológica de referencia de macroinvertebrados acuáticos Caicedo-Chacón, Luz-Yamile Barón-González, Henry-Javier Sánchez-Pedroza, Juan-Carlos Aguilar-Carreño, Carlos-Alberto Vega-Otálora, Kevin-Santiago Borja-Acosta, Kevin-Giancarlo colección biológica macroinvertebrados acuáticos plataforma bioinformática SCRUM ingeniería de software aquatic macroinvertebrates bioinformatics platform computational fluid dynamics subsidence software UNISANGIL has one of Colombia's five collections of aquatic macroinvertebrates, being the only one in the Department of Santander. The bioinformatics platform "Biological Collection - BiolCol" seeks to digitize the biological reference collection of macroinvertebrates of UNISANGIL-CBMUS. The design of BioCol was led by three students and the coordinator of the GIBD-SI of the UNISANGIL Systems Engineering Program. The work methodology applied in the development process was Scrum. Additionally, we followed the method Sampieri proposed to identify the needs, establish the objectives, define the scope, formulate the projected activities over time, and define the deliverables for developing the application. Based on the Darwin Core standard used by the Colombian biodiversity information system (SiB Colombia), we designed the system architecture, built models, and designed the database. To develop the interface, we used Laravel for the back end and NodeJS for the front end, and we integrated the images and 3D models of those specimens with available information. The platform allows the online registration, storage, and visualization of information CBMUS collection specimens. It also generates a label with a QR code for each individual, which enables queries of the data stored for each specimen. Overall, this platform aims to facilitate the registration, administration, and dissemination of biological collection information for researchers and the community in general. UNISANGIL posee una de las 5 colecciones de macroinvertebrados acuáticos del país y es la única en el departamento de Santander, a continuación, se describe el proceso de desarrollo de una plataforma bioinformática llamada "Biological Collection - BiolCol" por parte de tres estudiantes y la coordinadora del semillero GIBD-SI del programa de Ingeniería de Sistemas de UNISANGIL, con el objetivo de digitalizar la colección biológica de referencia de macroinvertebrados de UNISANGIL-CBMUS. La metodología de trabajo aplicada en el proceso de desarrollo fue SCRUM, adicionalmente se utilizó la metodología propuesta por el Sampieri para identificar la necesidad, establecer los objetivos, definir el alcance, formular las actividades proyectadas en el tiempo y definir los entregables del proyecto. Se diseñó la arquitectura del sistema, se construyeron modelos y se diseñó la base de datos tomando como referente el estándar Darwin Core utilizado por el sistema de información de biodiversidad de Colombia (SiB Colombia). Para el desarrollo de la interfaz de usuario se utilizaron las herramientas Laravel para el backend y NodeJS para el frontend, se integraron las imágenes y los modelos 3D de los especímenes que tenían la información disponible. La plataforma permite el registro, almacenamiento y visualización de información de los especímenes de la colección CBMUS a través de Internet y genera una etiqueta con código QR para cada individuo que permite la consulta de la información almacenada sobre cada macroinvertebrado registrado. Esta plataforma tiene como objetivo facilitar el registro, la administración y la divulgación de la información de la colección biológica, siendo muy importante para investigadores y la comunidad en general. Universidad Pedagógica y Tecnológica de Colombia 2023-05-06 info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion application/pdf text/xml https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525 10.19053/01211129.v32.n64.2023.15525 Revista Facultad de Ingeniería; Vol. 32 No. 64 (2023): April-June 2023 (Continuous Publication); e15525 Revista Facultad de Ingeniería; Vol. 32 Núm. 64 (2023): Abril-Junio 2023 (Publicación Continua); e15525 2357-5328 0121-1129 eng https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525/12874 https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525/13446 Copyright (c) 2023 Luz-Yamile Caicedo-Chacón, Henry-Javier Barón-González, Juan-Carlos Sánchez-Pedroza, Carlos-Alberto Aguilar-Carreño, Kevin-Santiago Vega-Otálora, Kevin-Giancarlo Borja-Acosta http://creativecommons.org/licenses/by/4.0 |
| spellingShingle | colección biológica macroinvertebrados acuáticos plataforma bioinformática SCRUM ingeniería de software aquatic macroinvertebrates bioinformatics platform computational fluid dynamics subsidence software Caicedo-Chacón, Luz-Yamile Barón-González, Henry-Javier Sánchez-Pedroza, Juan-Carlos Aguilar-Carreño, Carlos-Alberto Vega-Otálora, Kevin-Santiago Borja-Acosta, Kevin-Giancarlo BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title | BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_alt | BiolCol: Plataforma tecnológica para la difusión de la colección biológica de referencia de macroinvertebrados acuáticos |
| title_full | BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_fullStr | BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_full_unstemmed | BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_short | BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_sort | biolcol technological platform for the dissemination of the biological reference collection of aquatic macroinvertebrates |
| topic | colección biológica macroinvertebrados acuáticos plataforma bioinformática SCRUM ingeniería de software aquatic macroinvertebrates bioinformatics platform computational fluid dynamics subsidence software |
| topic_facet | colección biológica macroinvertebrados acuáticos plataforma bioinformática SCRUM ingeniería de software aquatic macroinvertebrates bioinformatics platform computational fluid dynamics subsidence software |
| url | https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525 |
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