Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers
In order to establish the molecular diversity of citrus production systems from Villa Sucre (Colombia), mainly "Creole mandarin", the study analyzed C. reticulata farm’s samples using six ISSR molecular markers. A total of 61 polymorphisms were characterized, 42% of them were highly common...
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| Format: | Online |
| Language: | eng |
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Sociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTC
2020
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| Online Access: | https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/9397 |
| _version_ | 1801706295587241984 |
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| author | Suárez-Contreras, Liliana Yanet Arango-Toloza, Michell Juliett Sánchez-Pabón, Izquel |
| author_facet | Suárez-Contreras, Liliana Yanet Arango-Toloza, Michell Juliett Sánchez-Pabón, Izquel |
| author_sort | Suárez-Contreras, Liliana Yanet |
| collection | OJS |
| description | In order to establish the molecular diversity of citrus production systems from Villa Sucre (Colombia), mainly "Creole mandarin", the study analyzed C. reticulata farm’s samples using six ISSR molecular markers. A total of 61 polymorphisms were characterized, 42% of them were highly common, with a mid- average polymorphic information content (PIC) of 0.42 indicating a high polymorphic variation. Molecular relations based in Dice coefficient and the UPGMA algorithm, showed the existing genetic relationships between the crop areas, grouping them in five separate clades and two main subgroups (MDS). This is the first molecular classification done in the area, sets the basis for mandarin crop molecular diversity, and provides vital information for mandarin crop management programs. |
| format | Online |
| id | oai:oai.revistas.uptc.edu.co:article-9397 |
| institution | Revista Colombiana de Ciencias Hortícolas |
| language | eng |
| publishDate | 2020 |
| publisher | Sociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTC |
| record_format | ojs |
| spelling | oai:oai.revistas.uptc.edu.co:article-93972021-07-13T03:22:01Z Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers Caracterización molecular de mandarina (Citrus reticulata Blanco) mediante marcadores ISSR Suárez-Contreras, Liliana Yanet Arango-Toloza, Michell Juliett Sánchez-Pabón, Izquel Polymorphisms Genetic diversity Citrus fruits Introduced varieties Plant breeding Plant genetic resources Polimorfismo Variabilidad genética Frutas cítricas Variedades naturalizadas Fitomejoramiento Recursos genéticos vegetales In order to establish the molecular diversity of citrus production systems from Villa Sucre (Colombia), mainly "Creole mandarin", the study analyzed C. reticulata farm’s samples using six ISSR molecular markers. A total of 61 polymorphisms were characterized, 42% of them were highly common, with a mid- average polymorphic information content (PIC) of 0.42 indicating a high polymorphic variation. Molecular relations based in Dice coefficient and the UPGMA algorithm, showed the existing genetic relationships between the crop areas, grouping them in five separate clades and two main subgroups (MDS). This is the first molecular classification done in the area, sets the basis for mandarin crop molecular diversity, and provides vital information for mandarin crop management programs. Con el propósito de establecer la diversidad molecular de sistemas de producción de cítricos provenientes de Villa Sucre (Colombia), principalmente "mandarina criolla", el estudio analizó muestras de fincas de C. reticulata utilizando seis marcadores moleculares ISSR. Se caracterizaron un total de 61 polimorfismos, el 42% de ellos fueron muy comunes, con un contenido de información polimórfica (PIC) promedio medio de 0.42 indicando una alta variación polimórfica. Relaciones moleculares basadas en el coeficiente de Dice y el algoritmo UPGMA, mostraron las relaciones genéticas existentes entre las áreas de cultivo, agrupándolas en cinco lados separados y dos subgrupos principales (MDS). Esta es la primera clasificación molecular realizada en el área, sienta las bases para la diversidad molecular del cultivo de mandarina y proporciona información vital para los programas de manejo del cultivo de mandarina. Sociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTC 2020-05-01 info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Text Texto application/pdf https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/9397 10.17584/rcch.2020v14i2.9397 Revista Colombiana de Ciencias Hortícolas; Vol. 14 No. 2 (2020); 168-177 Revista Colombiana de Ciencias Hortícolas; Vol. 14 Núm. 2 (2020); 168-177 Revista Colombiana de Ciencias Hortícolas; Vol. 14 No 2 (2020); 168-177 Revista Colombiana de Ciencias Hortícolas; V. 14 N. 2 (2020); 168-177 Revista Colombiana de Ciencias Hortícolas; v. 14 n. 2 (2020); 168-177 2422-3719 2011-2173 eng https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/9397/9890 Colombia; Norte de Santander; Arboledas Colombia; Norte de Santander; Arboledas Copyright (c) 2020 Revista Colombiana de Ciencias Hortícolas |
| spellingShingle | Polymorphisms Genetic diversity Citrus fruits Introduced varieties Plant breeding Plant genetic resources Polimorfismo Variabilidad genética Frutas cítricas Variedades naturalizadas Fitomejoramiento Recursos genéticos vegetales Suárez-Contreras, Liliana Yanet Arango-Toloza, Michell Juliett Sánchez-Pabón, Izquel Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers |
| title | Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers |
| title_alt | Caracterización molecular de mandarina (Citrus reticulata Blanco) mediante marcadores ISSR |
| title_full | Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers |
| title_fullStr | Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers |
| title_full_unstemmed | Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers |
| title_short | Molecular characterization of mandarin (Citrus reticulata Blanco) using ISSR markers |
| title_sort | molecular characterization of mandarin citrus reticulata blanco using issr markers |
| topic | Polymorphisms Genetic diversity Citrus fruits Introduced varieties Plant breeding Plant genetic resources Polimorfismo Variabilidad genética Frutas cítricas Variedades naturalizadas Fitomejoramiento Recursos genéticos vegetales |
| topic_facet | Polymorphisms Genetic diversity Citrus fruits Introduced varieties Plant breeding Plant genetic resources Polimorfismo Variabilidad genética Frutas cítricas Variedades naturalizadas Fitomejoramiento Recursos genéticos vegetales |
| url | https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/9397 |
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